「relationships」の検索結果

Generates automated test oracles to verify correct software behavior. Creates assertion-based oracles (expected values), property-based oracles (invariants), differential oracles (comparing implementations), and metamorphic oracles (input transformations). Use when you need to generate assertions for test cases, identify invariants that should always hold, compare new vs legacy implementations, create metamorphic test relationships, validate function correctness, or improve test coverage with better verification strategies. Supports Python (pytest, unittest, hypothesis) and Java (JUnit, property testing).

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Generate test cases using metamorphic testing by applying transformations based on metamorphic properties. Use when you need to expand test suites, test programs without oracles, validate mathematical or algorithmic properties, or detect subtle bugs through input-output relationships. The skill takes a program, original test cases, and metamorphic properties as input, generates new test cases by applying transformations, executes tests, verifies outputs satisfy properties, reports violations and anomalies, and outputs an expanded test suite with property coverage summary. Supports multiple programming languages and property types.

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Performs abstract interpretation to produce summarized execution traces and high-level program behavior representations. Highlights key control flow paths, variable relationships, loop invariants, function summaries, and potential runtime states using abstract domains (intervals, signs, nullness, etc.). Use when analyzing program behavior, understanding execution paths, computing loop invariants, tracking variable ranges, detecting potential runtime errors, or generating program summaries without concrete execution.

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Select, build, and validate Blender deformation and motion-control systems including Simple Deform, Curve, Lattice, Mesh Deform, Shrinkwrap, Surface Deform, Armature, shape keys, hooks, constraints, and drivers. Use when an object must bend, twist, taper, follow a path, conform to a surface, deform smoothly, articulate, or move through controlled mechanical relationships.

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Evaluate, compare, and manage vendor relationships. Trigger with "evaluate this vendor", "compare vendors", "vendor review", "should we renew", "RFP", or when the user is making procurement or vendor decisions.

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Map the big picture around a topic or software repository by identifying its boundaries, layers, actors, components, relationships, flows, history, fault lines, and open questions, then explain how the pieces fit together and where to look next. Use when a user asks to understand a whole field, domain, technology, ecosystem, industry, codebase, architecture, unfamiliar repo, or phrases such as "give me the big picture", "map the landscape", "how does this all fit together?", "help me get oriented", or "what am I missing?"

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Build structured knowledge graphs from unstructured text by extracting entities, mapping relationships, generating graph triples, and visualizing the result. Use when the user requests knowledge graph creation or provides relevant inputs for this workflow.

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Perform systematic exploratory data analysis to understand dataset structure, distributions, relationships, and anomalies before modeling. Use when a dataset is new, its quality is unknown, or the user requests open-ended profiling; use data-analysis instead for a defined hypothesis or decision question.

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Design normalized database schemas with tables, relationships, indexes, and constraints for any application domain. Use when the user requests database schema design or provides relevant inputs for this workflow.

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Think and work like an expert Medicinal Chemist. Use when a task calls for Medicinal Chemist judgment. Reasons from structure-activity relationships, lipophilicity and unbound-fraction physicochemistry, synthetic accessibility, and target-product-profile multiparameter optimization through LLE/Fsp3/QED scoring, FEP+/Glide docking validated against co-crystal and SPR data, ELN-tracked LC-MS/NMR synthesis, and DMPK panels (microsomal CL, Caco-2 efflux, hERG, CYP) while treating PAINS and aggregation assay artifacts, biochemical-versus-cellular potency gaps, reactive-metabolite soft spots, and freedom-to-operate cliffs as first-class failure modes.

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Track media coverage, press mentions, journalist activity, and industry narrative across news outlets, Twitter, and LinkedIn. Ideal for PR teams monitoring earned media, tracking campaign impact, and identifying journalist relationships.

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Find cross-database references between NCBI databases using Biopython Bio.Entrez (ELink). Use when navigating gene to protein/structure, sequence to publication, PubMed to GEO, BioProject to SRA runs, or discovering all link relationships for a record. Covers linkname semantics, cmd= variants, asymmetric link warnings, neighbor_history for >200 input IDs, and per-database link tables.

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Quality control and exploration of RNA-seq count matrices before differential expression. Check for outliers, batch effects, and sample relationships. Use when assessing count matrix quality before DE analysis.

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Compare gene regulatory and co-expression networks between biological conditions to identify rewired regulatory relationships using DiffCorr. Detects gained, lost, and reversed gene-gene correlations between conditions. Use when comparing co-expression networks between disease vs control, treatment conditions, or developmental stages.

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Build weighted gene co-expression networks to identify modules of co-regulated genes and relate them to phenotypes using WGCNA and CEMiTool. Detects hub genes and module-trait relationships from bulk or single-cell expression data. Use when finding co-expression modules, identifying hub genes, or relating gene networks to clinical or experimental variables.

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ESM2 protein language model for sequence scoring, embeddings, and plausibility checks. Use this skill when: (1) Computing pseudo-log-likelihood (PLL) scores, (2) Getting protein embeddings for clustering, (3) Filtering designs by sequence plausibility, (4) Zero-shot variant effect prediction, (5) Analyzing sequence-function relationships. For structure prediction, use chai1-structure-prediction or boltz-structure-prediction. For QC thresholds, use protein-design-qc.

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ESM2 protein language model for embeddings and sequence scoring. Use this skill when: (1) Computing pseudo-log-likelihood (PLL) scores, (2) Getting protein embeddings for clustering, (3) Filtering designs by sequence plausibility, (4) Zero-shot variant effect prediction, (5) Analyzing sequence-function relationships. For structure prediction, use chai or boltz. For QC thresholds, use protein-qc.

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Define how system components connect, establishing boundaries, patterns, and integration approaches during PRD v0.6 Architecture. Triggers on requests to design architecture, create system design, define component relationships, or when user asks "design architecture", "system design", "how do components connect?", "architecture decisions", "technical architecture", "system overview". Consumes TECH- (stack selections), RISK- (constraints), FEA- (features). Outputs ARC- entries documenting architecture decisions with rationale. Feeds v0.6 Technical Specification.

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Synthesize behavioral personas from prior stage evidence for journey mapping and marketing during PRD v0.4 User Journeys. Triggers on requests to define personas, create user profiles, identify target users, or when user asks "who are our users?", "define personas", "user profiles", "target users", "persona creation", "who uses this product?". Consumes CFD- (v0.1-v0.3), BR- (targeting from v0.3 Moat), FEA- (v0.3 Feature Value Planning). Outputs PER- entries with behavioral profiles and feature relationships. Feeds v0.4 User Journey Mapping.

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Analyze indexed codebases via graph database (neug) and vector index (zvec). Covers call graphs, dependencies, dead code, hotspots, module coupling, architecture reports, semantic search, impact analysis, bug root cause from GitHub issues, class diagrams (UML), and PR review (risk scoring, conflict detection, auto-merge candidates, labeling). Also covers creating, inspecting, and repairing a CodeScope index. Use for: code structure, who calls what, why something changed, similar functions, module boundaries, bug tracing, class relationships, PR risk/conflicts, or any question benefiting from a code knowledge graph. Applies when a `.codegraph` index exists in the workspace, or when the user wants to create one.

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Knowledge graph specialist for entity and causal relationship modelingUse when "knowledge graph, graph database, falkordb, neo4j, cypher query, entity resolution, causal relationships, graph traversal, graph-database, knowledge-graph, falkordb, neo4j, cypher, entity-resolution, causal-graph, ml-memory" mentioned.

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GraphQL gives clients exactly the data they need - no more, no less. One endpoint, typed schema, introspection. But the flexibility that makes it powerful also makes it dangerous. Without proper controls, clients can craft queries that bring down your server. This skill covers schema design, resolvers, DataLoader for N+1 prevention, federation for microservices, and client integration with Apollo/urql. Key insight: GraphQL is a contract. The schema is the API documentation. Design it carefully. 2025 lesson: GraphQL isn't always the answer. For simple CRUD, REST is simpler. For high-performance public APIs, REST with caching wins. Use GraphQL when you have complex data relationships and diverse client needs. Use when "graphql, graphql schema, graphql resolver, apollo server, apollo client, graphql federation, dataloader, graphql codegen, graphql query, graphql mutation, graphql, api, apollo, schema, resolvers, dataloader, federation, typescript" mentioned.

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Firebase gives you a complete backend in minutes - auth, database, storage, functions, hosting. But the ease of setup hides real complexity. Security rules are your last line of defense, and they're often wrong. Firestore queries are limited, and you learn this after you've designed your data model. This skill covers Firebase Authentication, Firestore, Realtime Database, Cloud Functions, Cloud Storage, and Firebase Hosting. Key insight: Firebase is optimized for read-heavy, denormalized data. If you're thinking relationally, you're thinking wrong. 2025 lesson: Firestore pricing can surprise you. Reads are cheap until they're not. A poorly designed listener can cost more than a dedicated database. Plan your data model for your query patterns, not your data relationships. Use when "firebase, firestore, firebase auth, cloud functions, firebase storage, realtime database, firebase hosting, firebase emulator, security rules, firebase admin, firebase, firestore, cloud-functions, serverless, backend, realtime, authentication, google-cloud" mentioned.

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World-class database schema design - data modeling, migrations, relationships, and the battle scars from scaling databases that store billions of rowsUse when "database schema, data model, migration, prisma schema, drizzle schema, create table, add column, foreign key, primary key, uuid, auto increment, soft delete, normalization, denormalization, one to many, many to many, junction table, polymorphic, enum type, index strategy, database, schema, migration, data-model, prisma, drizzle, typeorm, postgresql, mysql, sqlite" mentioned.

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