「ada」の検索結果

PhIPData defines an S4 class for phage-immunoprecipitation sequencing (PhIP-seq) experiments. Buliding upon the RangedSummarizedExperiment class, PhIPData enables users to coordinate metadata with experimental data in analyses. Additionally, PhIPData provides specialized methods to subset and identify beads-only samples, subset objects using virus aliases, and use existing peptide libraries to populate object parameters.

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A post hoc cell type classification tool to fine-tune cell type annotations generated by any cell type classification procedure with semi-supervised learning algorithm AdaSampling technique. The current version of scReClassify supports Support Vector Machine and Random Forest as a base classifier.

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MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis. It uses scoring matrices to be used in these pairwise distance calcualtions which can be adapted to any scoring for DNA or AA characters. E.g. by using literal distances MSA2dist calculates pairwise IUPAC distances.

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This R package supports interactive visualization of multi-channel images and segmentation masks generated by imaging mass cytometry and other highly multiplexed imaging techniques using shiny. The cytoviewer interface is divided into image-level (Composite and Channels) and cell-level visualization (Masks). It allows users to overlay individual images with segmentation masks, integrates well with SingleCellExperiment and SpatialExperiment objects for metadata visualization and supports image do

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Provides a high-level R interface to CoreArray Genomic Data Structure (GDS) data files. GDS is portable across platforms with hierarchical structure to store multiple scalable array-oriented data sets with metadata information. It is suited

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Universal LaTeX document skill: create, compile, and convert any document to professional PDF with PNG previews. Supports resumes, reports, cover letters, invoices, academic papers, theses/dissertations, academic CVs, presentations (Beamer), scientific posters, formal letters, exams/quizzes, books, cheat sheets, reference cards, exam formula sheets, fillable PDF forms (hyperref form fields), conditional content (etoolbox toggles), mail merge from CSV/JSON (Jinja2 templates), version diffing (latexdiff), charts (pgfplots + matplotlib), tables (booktabs + CSV import), images (TikZ), Mermaid diagrams, AI-generated images, watermarks, landscape pages, bibliography/citations (BibTeX/biblatex), multi-language/CJK (auto XeLaTeX), algorithms/pseudocode, colored boxes (tcolorbox), SI units (siunitx), Pandoc format conversion (Markdown/DOCX/HTML ↔ LaTeX), and PDF-to-LaTeX conversion of handwritten or printed documents (math, business, legal, general). Compile script supports pdflatex, xelatex, lualatex with auto-detection, latexmk backend, texfot log filtering, PDF/A output, and verbosity control (--verbose/--quiet). Empirically optimized scaling: single agent 1-10 pages, split 11-20, batch-7 pipeline 21+. Use when user asks to: (1) create a resume/CV/cover letter, (2) write a LaTeX document, (3) create PDF with tables/charts/images, (4) compile a .tex file, (5) make a report/invoice/presentation, (6) anything involving LaTeX or pdflatex, (7) convert/OCR a PDF to LaTeX, (8) convert handwritten notes, (9) create charts/graphs/diagrams, (10) create slides, (11) write a thesis or dissertation, (12) create an academic CV, (13) create a poster, (14) create an exam/quiz, (15) create a book, (16) convert between document formats (Markdown, DOCX, HTML to/from LaTeX), (17) generate Mermaid diagrams for LaTeX, (18) create a formal business letter, (19) create a cheat sheet or reference card, (20) create an exam formula sheet or crib sheet, (21) condense lecture notes/PDFs into a cheat sheet, (22) create a fillable PDF form with text fields/checkboxes/dropdowns, (23) create a document with conditional content/toggles (show/hide sections), (24) generate batch/mail-merge documents from CSV/JSON data, (25) create a version diff PDF (latexdiff) highlighting changes between documents, (26) create a homework or assignment submission with problems and solutions, (27) create a lab report with data tables, graphs, and error analysis, (28) encrypt or password-protect a PDF, (29) merge multiple PDFs into one, (30) optimize/compress a PDF for web or email, (31) lint or check a LaTeX document for common issues, (32) count words in a LaTeX document, (33) analyze document statistics (figures, tables, citations), (34) fetch BibTeX from a DOI, (35) convert a Graphviz .dot file to PDF/PNG, (36) convert a PlantUML .puml file to PDF/PNG, (37) create a one-pager/fact sheet/executive summary, (38) create a datasheet or product specification sheet, (39) extract pages from a PDF (page ranges, odd/even), (40) check LaTeX package availability before compiling, (41) analyze citations and cross-reference with .bib files, (42) debug LaTeX compilation errors, (43) make a document accessible (PDF/A, tagged PDF), (44) create lecture notes or course handouts, (45) fill an existing PDF form (fillable fields or non-fillable with annotations), (46) extract text or tables from a PDF (pdfplumber, pypdf), (47) OCR a scanned PDF to text (pytesseract), (48) create a PDF programmatically with reportlab (Canvas, Platypus), (49) rotate or crop PDF pages (pypdf), (50) add a watermark to an existing PDF, (51) extract metadata from a PDF (title, author, subject).

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带用户精读一篇文章/文档并真正学透（不是出摘要）。五步：抽干货 → 切讲次 → 每讲跑「学-考-讲」循环 → 对号入座 → 实操+测验+讲错题+蒸馏。每讲产出 HTML 课件 + 笔记落盘；讲完必考一次，用户复述后必须挑不精确处拧紧；抽象概念上可交互演示（能点能跑）；全程用用户自己的业务场景当案例；学完出多题型自动判分测验卷，最后把收获蒸馏回用户的工具。核心触发条件是用户要的是"学会"而不是"要一份结果"，例如"我们一起学这篇文章/这个链接"、"带我学"、"精读"、"我想学会 X"、"这篇我看不懂你给我讲讲"。有具体材料（链接、本地文件、PDF，或用户自己的 skill/文档/代码）时直接开跑；只有学习意图而没材料时仍走本 skill，但开工第一件事是和用户一起把材料定下来，禁止凭记忆开讲。不适用于：只要一份总结/摘要/教程长文，用户读完就完、不需要答题（用 readable-output）、只是搜集资料做调研（使用可用的网页/平台取材工具）、帮我写 PRD/测试用例（用 prd-test-writer）、以及用户其实是想让你直接把活干了（那就直接做）。

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产出给人读的 HTML 长文——把已有的素材、经历、资料想清楚再写出来。每次触发先用 AskUserQuestion 一次性问清「给谁看 / 读完拿什么 / 多长 / 风格 + 侧重」4 个关键参数，再按 6 阶段框架输出。**产出只有 HTML 一种格式**——用户要 markdown 或要在聊天里直接说，就不该用本 skill。当用户说"做个复盘""汇总一下""总结这堆""整理成 HTML""做个教程/学习指南""把 X 讲清楚"等需要超过 500 字的结构化阅读内容时触发。不适用于：项目的计划报告/框架计划/版本路线（用 issue-pool，它自带 md2html）、PRD/需求文档/测试用例（用 prd-test-writer）、整页界面方案（用 page-solution-design）、起名（用 product-naming）、写代码/修 bug/改文件、一两句话就能答完的问题。

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Expert knowledge for Azure Oracle development including troubleshooting, security, and integrations & coding patterns. Use when configuring Oracle TDE with Azure Key Vault, fixing Oracle@Azure issues, or exporting Exadata logs to Azure Monitor/Sentinel, and other Azure Oracle related development tasks. Not for Azure SQL Database (use azure-sql-database), Azure SQL Managed Instance (use azure-sql-managed-instance), SQL Server on Azure Virtual Machines (use azure-sql-virtual-machines), SAP HANA on Azure Large Instances (use azure-sap).

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Monitor external web and social mentions of the operator's active projects - surface what people are discovering, where they're confused, and where to engage

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Provides guidance for writing and benchmarking optimized Triton kernels for AMD GPUs (MI355X, R9700) on ROCm, targeting HuggingFace diffusers (LTX-Video, SD3, FLUX) and transformers. Core kernels: RMSNorm, RoPE 3D, GEGLU, AdaLN. Includes XCD swizzle, autotune, diffusers integration patterns, and LTX-Video pipeline injection.

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Use this skill when modifying templates, admin UI, output, hooks, plugin metadata, sanitization, escaping, or any code that must remain compliant with WordPress.org and repository PHPCS rules.

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Advanced full SEO audit skill. Runs its own full workflow from local scripts, including the basic SEO checks plus PageSpeed, social metadata, and advanced review modules when available.

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Before compaction Loopkit extracts decisions into claude-decisions.json (machine-readable). Read it alongside claude-progress.txt at session start — prose is for humans, JSON is for the loop.

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Flatten deeply nested conditionals into readable, early-return code. Use on any function with 3+ levels of indentation.

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Maintains a repo-local task forest or task DAG for the current workspace. Use when the user asks to initialize or update a task forest, close a session, summarize evolving project work, align a request with a global goal, track progress/history/deviations/todos, save or apply a task proposal, or export the client-readable task-forest HTML. Do not use for executing the tracked tasks themselves or for generic HTML work.

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Clean Code principles (DRY, KISS, YAGNI), naming, function design and readability. Use when code is hard to read, with long methods, unclear names, duplication or deep nesting. For how responsibilities are split across classes and which way dependencies point, use solid-principles instead.

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Pre-production story-and-character development for Higgsfield projects — the upstream layer that decides WHAT to prompt before any model runs. Use when the user wants to build a character, design a world, develop a story or premise, create a character sheet / character bible / story bible, lock a visual style or 'visual DNA', plan a multi-shot narrative with consistent characters, or says things like 'help me design a character', 'build the world', 'I need a backstory', 'make this character consistent across shots', 'develop my film/series concept', or 'I keep getting generic AI characters'. Routes the locked outputs into higgsfield-prompt + the right model. Adapted from Higgsfield's official character-design framework by @vavavinca.

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Repurpose one piece of affiliate content into multiple formats. Triggers on: "repurpose my content", "turn my blog into tweets", "cross-post this", "content recycling", "convert to newsletter", "make a tweet thread from this", "adapt for TikTok", "omnichannel content", "scale my content", "turn this into a LinkedIn post", "repurpose for email", "content multiplication".

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Repurpose and atomize content across platforms and formats. Use when the user says "repurpose this", "turn this into", "convert blog to", "make a thread from", "content atomization", "repurpose content", "turn this article into social posts", or asks about adapting content from one format to another.

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Create lead magnets and gated content to capture email subscribers and leads. Use when asked to design checklists, templates, calculators, mini-courses, whitepapers, or other downloadable content offers. Trigger phrases: "lead magnet", "gated content", "email capture", "content offer", "free download", "checklist", "template", "whitepaper", "swipe file", "content upgrade", "opt-in offer".

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Convert YouTube videos to SEO-optimized blog posts. Extract video title, description, and content, then generate a search-engine-friendly blog post with embedded video, cover images, optimized metadata, structured Markdown sections, clean resource blocks, and canonical 5-8 keywords. Auto-generates English filenames and saves to the configured Hexo blog posts directory. Includes tag management rules to maintain a clean, consistent tag taxonomy.

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Upload and fully manage YouTube videos and live events: metadata, thumbnails, captions, playlists, scheduled broadcasts, encoder streams, binding, lifecycle transitions, and cleanup.

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Analyze files and get detailed metadata including size, line counts, modification times, and content statistics. Use when users request file information, statistics, or analysis without modifying files.

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