Assembles a genome de novo from Illumina short reads with SPAdes (isolate/careful/sc/meta/plasmid/rna modes), MEGAHIT (low-memory, huge datasets), Unicycler (bacterial finishing/hybrid), MaSuRCA (large hybrid), ABySS (Bloom-filter), and Platanus (heterozygous diploids), using multi-k de Bruijn graphs. Covers the repeat-resolution limit, why N50 plateaus at the genome not the depth, GenomeScope2 k-mer profiling first, the heterozygosity/haplotig trap, error-correction erasing rare alleles, GC dropout, and NG50/auN/BUSCO reporting. Use when assembling a bacterial isolate, fungal, small-eukaryotic, single-cell, or metagenome genome from Illumina reads, or when deciding whether short reads can even produce the assembly being asked for.
日本語の概要は準備中です。原文の説明を表示しています。
peacezha/TRACE☆ 32026年10月13日 更新
Align preprocessed CLIP-seq reads (eCLIP, iCLIP, iCLIP2, PAR-CLIP) to genome with STAR or bowtie2 using crosslink-preserving parameters, choosing between unique-mapper-only and multi-mapper-aware alignment for repeat-binding RBPs, deciding STAR vs HISAT2 memory trade-offs, and applying ENCODE-compatible filters. Use when turning preprocessed CLIP FASTQ into a deduplicated, MAPQ-filtered BAM ready for peak calling or crosslink-site detection.
日本語の概要は準備中です。原文の説明を表示しています。
peacezha/TRACE☆ 32026年10月13日 更新
Provides integration patterns for LangChain4j with Spring Boot. Configures AI model beans, sets up chat memory with Spring context, integrates RAG pipelines with Spring Data, and handles auto-configuration, dependency injection, and Spring ecosystem integration. Use when embedding LangChain4j into Spring Boot applications, building Java LLM applications with @Bean configuration, or setting up Spring AI patterns.
日本語の概要は準備中です。原文の説明を表示しています。
lgzarturo/springboot-course☆ 32026年10月12日 更新
Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx) or Word templates (.dotx). Triggers include: any mention of Microsoft Word Documents, such as 'Word doc', 'word document', '.docx', '.dotx', 'microsoft doc'. Also use when extracting or reorganizing content from .docx or .dotx files, inserting or replacing images in documents, find-and-replace in Word files, working with tracked changes or comments, or converting content into a polished Word document. If the user asks for a deliverable as a Word or .docx file (to download, email or print), use this skill. However, if they ask for a document, page, report, memo, or notes WITHOUT naming a file format and the session offers Claude's own dedicated document or page skill or connector, use that instead, even if they will email or print it. Do NOT use for PDFs, spreadsheets, Google Docs, or coding unrelated to document generation.
日本語の概要は準備中です。原文の説明を表示しています。
sebastianbreguel/dotfiles☆ 32026年10月8日 更新
Expert in designing and building autonomous AI agents. Masters tool use, memory systems, planning strategies, and multi-agent orchestration.
日本語の概要は準備中です。原文の説明を表示しています。
phoroth/AGENTIC☆ 32026年8月8日 更新
Generate a concise 1-page investment brief from a thesis — the elevator pitch version. Use when user says "brief", "summarise thesis", "pitch me [TICKER]", "one-pager", or "investment memo".
日本語の概要は準備中です。原文の説明を表示しています。
jameswong2011/InvestmentVault☆ 32026年9月9日 更新
Tag a thesis's implicit macro bets — the macro variables its bull case is secretly levered to (AI capex, rates, FX, China decoupling, memory/HBM cycle, energy, regulation) with direction and magnitude. Use when user says "macro exposure", "what macro is [TICKER] betting on", "macro bets", or "rate exposure for [TICKER]".
日本語の概要は準備中です。原文の説明を表示しています。
jameswong2011/InvestmentVault☆ 32026年9月9日 更新
Vibrant, high-contrast palettes and gradients for engaging, memorable, and modern user experiences.
日本語の概要は準備中です。原文の説明を表示しています。
WyvernCW/Monich☆ 32026年6月20日 更新
Apply systematic root cause analysis and debugging methodologies to diagnose and fix bugs, test failures, and unexpected behavior. Use when encountering production issues, investigating test failures, diagnosing performance problems, tracing error sources through call stacks, analyzing logs and stack traces, reproducing inconsistent bugs, debugging race conditions, investigating memory leaks, or applying scientific method to problem-solving before proposing fixes.
日本語の概要は準備中です。原文の説明を表示しています。
Fabric-Pro/fabric-oss☆ 32026年10月9日 更新
Scrap and regenerate the in-flight EF migrations on the current branch as one consolidated migration. Use when migrations have accumulated mid-development cruft (added/removed columns, stacked add-column-to-existing-table fixes, hand-edited SQL that needs to come out, schema changes that should have been one migration but ended up as five), or when the branch has merged main and its migrations are now stuck mid-chain so `dotnet ef migrations remove` is unsafe. Triggers on phrases like 'regen the migrations', 'redo these migrations', 'scrap and regen migrations', 'consolidate the in-flight migrations', 'redo the migration stack', or any time an agent hits the mid-chain situation in `memory/architecture/migration-regen-after-rebase.md`.
日本語の概要は準備中です。原文の説明を表示しています。
nobodies-collective/Humans☆ 32026年10月14日 更新
Check an externally created PR for coding rule violations against memory/INDEX.md atoms and docs/architecture/code-review-rules.md.
日本語の概要は準備中です。原文の説明を表示しています。
nobodies-collective/Humans☆ 32026年10月14日 更新
Introduce the cross-section read interface boundary (I<Section>ServiceRead) for one section's service per memory/architecture/section-read-write-split.md. Audits the surface, evaluates which methods belong on the read interface, sets up the workspace, dispatches a subagent that introduces the interface and migrates non-section callers, opens a PR. Use when the user says 'read split for X', 'split <Section>Service', 'add I<Section>ServiceRead boundary', 'apply the section-read-write-split rule to <Section>', or any variation of carving the cross-section read surface out of a section's full service interface. Reference implementation is Teams (PR 678). Operates on one section per invocation.
日本語の概要は準備中です。原文の説明を表示しています。
nobodies-collective/Humans☆ 32026年10月14日 更新
50 core Rust coding conventions covering naming, data types, strings, error handling, memory, concurrency, async, and modern crate recommendations. Use when reviewing code style or setting up project conventions.
日本語の概要は準備中です。原文の説明を表示しています。
heyAyushh/stacc☆ 32026年9月21日 更新
Orchestrate continual learning by delegating transcript mining and AGENTS.md updates to `agents-memory-updater`.
日本語の概要は準備中です。原文の説明を表示しています。
heyAyushh/stacc☆ 32026年9月21日 更新
Audit and improve SwiftUI runtime performance from code review and architecture. Use for requests to diagnose slow rendering, janky scrolling, high CPU/memory usage, excessive view updates, or layout thrash in SwiftUI apps, and to provide guidance for user-run Instruments profiling when code review alone is insufficient.
日本語の概要は準備中です。原文の説明を表示しています。
heyAyushh/stacc☆ 32026年9月21日 更新
Use when the user asks to switch AI role/mode/persona or uses role-trigger words such as Captain, Coordinator, 寫文章, 寫文章模式, 文章模式, 技術文章, 部落格, 出版, 預覽. Routes the request to Project Captain, Publishing Director, or Article Writing Mode, loads the matching keep memory when available, and applies the role's workflow without excessive roleplay.
日本語の概要は準備中です。原文の説明を表示しています。
eaglhuang/3klife☆ 32026年10月14日 更新
Ground framework-specific implementation in official documentation — detect stack versions, fetch authoritative docs, implement cited patterns, cite sources. Load when building with a library or framework where API correctness matters, when the user wants verified or documented code, or before writing framework code from memory. Also triggers on "source driven development", "cite the docs", "check official documentation", "verify against docs", "don't hallucinate APIs". Not for pure logic or renames. Pairs with feature-spec and test-driven-development.
日本語の概要は準備中です。原文の説明を表示しています。
dvy1987/agent-loom☆ 32026年8月8日 更新
Write concise next-agent handoff summaries across sessions, tools, and coding agents. Load when the user says handoff, next agent should know, save context, summarize where we are, switching agents, before ending a meaningful session, or when the user asks to commit, push, commit and push, create a git commit, push to origin, or publish commits — commit/push requests MUST run this skill first to prepare handoff docs, then proceed with git operations.
日本語の概要は準備中です。原文の説明を表示しています。
dvy1987/agent-loom☆ 32026年8月8日 更新
Record durable project decisions with rationale, alternatives, assumptions, status, and revisit triggers. Load when the user says record this decision, we decided, decision log, why did we choose, revisit this later, or capture architectural/process rationale.
日本語の概要は準備中です。原文の説明を表示しています。
dvy1987/agent-loom☆ 32026年8月8日 更新
Bootstrap full agent infrastructure for an existing, already-coded project without modifying a single line of source code. Surveys the repo, infers conventions from manifests, README, git history, and source samples, then generates the missing AGENTS.md, docs/architecture.md, docs/product-soul.md, ADR backfill, and seeded docs/memory/ files. Asks the user only about gaps the repo cannot reveal. Load when the user asks to "retroactive project setup", "backfill agent infrastructure", "bootstrap agents for this existing repo", "onboard agents to a legacy codebase", "set up agents without touching code", or "fill in missing agent context for this project".
日本語の概要は準備中です。原文の説明を表示しています。
dvy1987/agent-loom☆ 32026年8月8日 更新
Manage Apple Notes via the memo CLI on macOS (create, view, search, edit).
日本語の概要は準備中です。原文の説明を表示しています。
q2805187159/Anvil☆ 32026年6月24日 更新
Interact with DeerFlow AI agent platform via its HTTP API. Use this skill when the user wants to send messages or questions to DeerFlow for research/analysis, start a DeerFlow conversation thread, check DeerFlow status or health, list available models/skills/agents in DeerFlow, manage DeerFlow memory, upload files to DeerFlow threads, or delegate complex research tasks to DeerFlow. Also use when the user mentions deerflow, deer flow, or wants to run a deep research task that DeerFlow can handle.
日本語の概要は準備中です。原文の説明を表示しています。
q2805187159/Anvil☆ 32026年6月24日 更新
Debug LangChain and LangGraph agents by fetching execution traces from LangSmith Studio. Use when debugging agent behavior, investigating errors, analyzing tool calls, checking memory operations, or examining agent performance. Automatically fetches recent traces and analyzes execution patterns. Requires langsmith-fetch CLI installed.
日本語の概要は準備中です。原文の説明を表示しています。
q2805187159/Anvil☆ 32026年6月24日 更新
Write efficient C code with proper memory management, pointer
日本語の概要は準備中です。原文の説明を表示しています。
nimoqup046-collab/agora☆ 32026年3月26日 更新