Research, academic papers, education, and exam prep (4.7K skills)
Identify survey/review papers in a retrieved set and extract taxonomy seeds into `outline/taxonomy.yml` (topics/subtopics/terminology).
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Polish a single H3 unit file under `sections/` into survey-grade prose (de-template + contrast/eval/limitation), without changing citation keys.
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Build or validate the source manifest for the source-tutorial pipeline from user-provided URLs/files.
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Map papers from the core set to each outline subsection and write `outline/mapping.tsv` with coverage tracking.
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Bind papers to chapter-level sections first, writing `outline/section_bindings.jsonl` and `outline/section_binding_report.md`.
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Normalize cross-skill JSONL interfaces (ids + titles + citation key formats) so downstream skills do not rely on best-effort joins.
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Use when `paper-review` has claims plus evidence gaps and needs the final referee-style report.
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Run a research Workflow end to end when the user requests a survey, brief, review, tutorial, or idea exploration; route an unbound goal, execute one eligible Unit at a time, and stop at checkpoints or diagnosed failures.
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Write `output/DRAFT.md` (or `output/SNAPSHOT.md`) from an approved outline and evidence packs, using only verified citation keys from `citations/ref.bib`.
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Post-merge paper-voice gate: inspect the reader-facing draft for planner-talk and axis-label artifacts, then route fixes to the actual source.
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Route an unbound research Goal to one Workflow or materialize its initial C0 kickoff block; use during initial binding, not for later checkpoint summaries or approval.
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Write structured notes for each paper in the core set into `papers/paper_notes.jsonl` (summary/method/results/limitations).
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Create per-subsection evidence packs (NO PROSE): claim candidates, concrete comparisons, evaluation protocol, limitations, plus citation-backed evidence snippets with provenance.
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PRODUCES a citation-budget plan/report (`output/CITATION_BUDGET_REPORT.md`); does NOT edit the draft. Allocates an in-scope per-H3 budget (NO NEW FACTS) so drafts stop failing the global unique-citation gate; citation-injector applies it.
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Build per-chapter (H2) writing briefs (NO PROSE) so the final survey reads like a paper (chapter leads + cross-H3 coherence) without inflating the ToC.
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Curate reader-facing survey tables for the Appendix (clean layout + high information density), using only in-scope evidence and existing citation keys.
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Use when a broad paper candidate pool needs deterministic deduplication and a stable core set.
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Generate and verify BibTeX entries from paper notes, writing `citations/ref.bib` and `citations/verified.jsonl`.
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Synthesize the shortlist into a discussion-ready research idea brainstorm memo, writing `output/REPORT.md`, `output/APPENDIX.md`, and `output/REPORT.json`.
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Global consistency review for survey drafts: terminology, cross-section coherence, and scope/citation hygiene.
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Regression-check citation anchoring (citations stay in the same subsection) to prevent “polish drift” that breaks claim→evidence alignment.
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Rewrite limitation passages so the paper keeps limitations without falling into count-based slot phrases (e.g., \"Two limitations…\") across many H3s.
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Multi-route literature expansion + metadata normalization for evidence-first surveys.
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Use when an approved tutorial spec exists and the run needs a deterministic prerequisite graph before module planning.
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